BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B03SP1|AL426638
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1432 1511 0.0
>3x_Contig1432
Length = 8634
Score = 1511 bits (762), Expect = 0.0
Identities = 764/765 (99%)
Strand = Plus / Minus
Query: 1 attgaaaagtccatggttcccagttagaagaatgacctgctggactctaagcagattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4597 attgaaaagtccatggttcccagttagaagaatgacctgctggactctaagcagattctc 4538
Query: 61 catttggatcttggatgatcgtaccgaatttttaatgccggtactaaatcctatcatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4537 catttggatcttggatgatcgtaccgaatttttaatgccggtactaaatcctatcatgga 4478
Query: 121 aactttactggacaaaaagaaaggtgtccaagaggcagccattacggcaattgccacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4477 aactttactggacaaaaagaaaggtgtccaagaggcagccattacggcaattgccacttt 4418
Query: 181 tatcgagaatagtgatcctgatatagttggtacagtcctatatgagccactattagacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4417 tatcgagaatagtgatcctgatatagttggtacagtcctatatgagccactattagacag 4358
Query: 241 attcgacgaatgtttcagattctatcaaaagaaaaacttaatcattttgtatgatgcggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4357 attcgacgaatgtttcagattctatcaaaagaaaaacttaatcattttgtatgatgcggt 4298
Query: 301 cagtaggttgagcgagaagtgtgatcttgatgaacaagctattacgaagttacttcccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4297 cagtaggttgagcgagaagtgtgatcttgatgaacaagctattacgaagttacttcccca 4238
Query: 361 tttattgaacaaatggtctgctttggacgacaatgacaaagaactctggccactcctgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 tttattgaacaaatggtctgctttggacgacaatgacaaagaactctggccactcctgga 4178
Query: 421 gtgtttatcgtatgtatcaacatctttaggccccaggttcgctccgatggctatggaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 gtgtttatcgtatgtatcaacatctttaggccccaggttcgctccgatggctatggaagt 4118
Query: 481 ttacaatagagcttggaatattctctgcagatgtgttgatttagaagccaaatcacaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4117 ttacaatagagcttggaatattctctgcagatgtgttgatttagaagccaaatcacaagt 4058
Query: 541 tgatccaacgatagtgnttcctgaaaaagatttcatcataacttcacttgatttaattga 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 tgatccaacgatagtggttcctgaaaaagatttcatcataacttcacttgatttaattga 3998
Query: 601 cgggttagtccaggggttaggttacgattccaaggcccttttattcccaaatcatgatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3997 cgggttagtccaggggttaggttacgattccaaggcccttttattcccaaatcatgatac 3938
Query: 661 caacatgttttccgtcatcttgcaatgtttacaagatcacagccatgaggtaagacaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 caacatgttttccgtcatcttgcaatgtttacaagatcacagccatgaggtaagacaaag 3878
Query: 721 tgcatacgcgctactgggagatatagcatattactacgagaggca 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 tgcatacgcgctactgggagatatagcatattactacgagaggca 3833
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5243
Number of Sequences: 1807
Number of extensions: 5243
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)